PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027085414.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 206aa MW: 23529.8 Da PI: 6.5152

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027085414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.5	1e-31	143	201	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver++edp++v++tYeg Hnh+ XP_027085414.1 143 LDDGFKWRKYGKKMVKNSPNPRNYYRCSIEGCPVKKRVERDKEDPRYVITTYEGIHNHQ 201 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MNIYQHLTTT ALHFTSLHLS SSIMDGNYDP NRFTNMSGYN YNSSSAFGSS YSSGMISTGY 60 GDTNQSNFQV SEFFELDDWM EEDQTFMPSG YSTAQSPQQE LTEVLGHPGG SSSQQTNRDI 120 GGKERKENRE KVAFKTKSEV EILDDGFKWR KYGKKMVKNS PNPRNYYRCS IEGCPVKKRV 180 ERDKEDPRYV ITTYEGIHNH QGPSQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	6e-45	WRKY family protein