PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027084726.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 390aa MW: 43884.9 Da PI: 4.4506

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027084726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114	9.7e-36	49	140	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++++ed++++++isws+ nsfvv+d+++f++++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F g+k+ll++ XP_027084726.1 49 FLTKTFDMVEDPSTDSVISWSKARNSFVVWDSHKFSTSLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANECFLGGQKHLLKT 134 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+++ XP_027084726.1 135 IRRRRN 140 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MENVTIKIEE EEEGFVFPFS DGGSTGAAAG SSSSPRPMEG LHDMGPPPFL TKTFDMVEDP 60 STDSVISWSK ARNSFVVWDS HKFSTSLLPK YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA 120 NECFLGGQKH LLKTIRRRRN VIPSITQQEG GGPCVESGHY DLEEEIERLK SDRNSLMAEV 180 IKLKQQQQTA RDHVMAMDER IKGTEKKQQQ TMSFLARAFS NPTFLQPYVD RHRQRQEQQR 240 IQIGHKRRLT MTPSVENLQE VASIAADADQ LLNDSGGEQE LVNMQREMET LLFTAALDDE 300 PSSIVNLNSP SIPTSSAANV DPVAEHIWEE LLTGDLVTEN EAEVVLLGDQ PEADVEVEDL 360 VAETPEWGEG FSDLVDQMGY LIAKPDDTSK

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MENVTIKIEE EEEGFVFPFS DGGSTGAAAG SSSSPRPMEG LHDMGPPPFL TKTFDMVEDP  60
STDSVISWSK ARNSFVVWDS HKFSTSLLPK YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA  120
NECFLGGQKH LLKTIRRRRN VIPSITQQEG GGPCVESGHY DLEEEIERLK SDRNSLMAEV  180
IKLKQQQQTA RDHVMAMDER IKGTEKKQQQ TMSFLARAFS NPTFLQPYVD RHRQRQEQQR  240
IQIGHKRRLT MTPSVENLQE VASIAADADQ LLNDSGGEQE LVNMQREMET LLFTAALDDE  300
PSSIVNLNSP SIPTSSAANV DPVAEHIWEE LLTGDLVTEN EAEVVLLGDQ PEADVEVEDL  360
VAETPEWGEG FSDLVDQMGY LIAKPDDTSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-110	HSF family protein