PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027084416.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 315aa    MW: 35411.5 Da    PI: 6.3792
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027084416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.4e-29156215159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +C+vkkkv+rs  dp++++ tYegeHnh+
  XP_027084416.1 156 VKDGYHWRKYGQKVTKDNPSPRAYYKCSFApSCQVKKKVQRSVGDPSILVATYEGEHNHQ 215
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDTILEEECL AFDLNTAPAR KAFDSLKPDF EDGHDLVLDE SKSTSGKEEP DDLIDQLNQM  60
KSENRKLKEM LIDLSENYNT LQNHLVDLVQ KHSGDQLTKS RKRKFEAQNS FNSYANEGWN  120
DSLSEAEGSP KRPKEIRTHI SRVHVRVDPS DTSLVVKDGY HWRKYGQKVT KDNPSPRAYY  180
KCSFAPSCQV KKKVQRSVGD PSILVATYEG EHNHQHPLRD EMLVSSAVHG ADAAALSSSL  240
KCLEFSSGPK EAVDFMDRGL RHKFQRSVPE MESNSIQQLM VEQMASSLTR NASFTAALAA  300
AISGRLLSHD SDQEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.16e-62WRKY family protein