PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027084109.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 361aa MW: 41618.8 Da PI: 6.3537

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027084109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.3	2.5e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++k+++l +vik+vd+y++ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ XP_027084109.1 7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKDVDLYRIEPWDLQElcKIGTeEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100 69**************************.9***********954555552555******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k++l+g++ktLvfykgrap+g+k+dW+mheyrle XP_027084109.1 101 YS-KHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK DVDLYRIEPW DLQELCKIGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSKHSLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKRLTT VRKEGDLESL CWYDDQVSFM 180 PEFDSPRRIP QSYSSYNPQY SCKQEFELQN NIPQDVFLQL PQLESPKVPQ SITNVSCSLM 240 VPYGFDRSSG SILQSSTLAH EAPHLQQSHQ AQIVYINNTD QGVEQVTDWR VLDKFVASQL 300 SHEDAAKQTA YSDGPSSLQV AEHMNMLVND ESKQQEMTSP EFGCVSAPSP QVIFGSKNML 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK DVDLYRIEPW DLQELCKIGT  60
EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSKHSLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKRLTT VRKEGDLESL CWYDDQVSFM  180
PEFDSPRRIP QSYSSYNPQY SCKQEFELQN NIPQDVFLQL PQLESPKVPQ SITNVSCSLM  240
VPYGFDRSSG SILQSSTLAH EAPHLQQSHQ AQIVYINNTD QGVEQVTDWR VLDKFVASQL  300
SHEDAAKQTA YSDGPSSLQV AEHMNMLVND ESKQQEMTSP EFGCVSAPSP QVIFGSKNML  360
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-146	NAC family protein