PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027084082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ARR-B | ||||||||
Protein Properties | Length: 557aa MW: 61816.9 Da PI: 5.9524 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.1 | 4e-28 | 314 | 367 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_027084082.1 314 SKVDWTPELHKKFVQAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 367 6899****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 44.6 | 3.2e-14 | 316 | 365 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_027084082.1 316 VDWTPELHKKFVQAVEQLGIDqaIPSRILELMKvEGLTRHNVASHLQKYR 365 57***********************************************7 PP | |||||||
3 | Response_reg | 34.7 | 9.5e-13 | 24 | 129 | 2 | 109 |
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 l+++ + + +r le+ +y +v + + eal + +k +++ ++ ++ +++G+ +k +++++ +lp i++++++ +++ +++ +Ga XP_027084082.1 24 LLIESDACSAVEMRLKLEEMDY-IVSIFCNENEALSAISNKSecFHVAIVEVNTQNSSGI--FKFLETAN-DLPTIMISDNNCISTMMKCIALGA 114 666666666667778889****.***************999999*************995..78888877.9*********************** PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +fl Kp++ ++l + XP_027084082.1 115 VEFLQKPVSDDKLQN 129 **********99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MPAMVCTADE LLGWKDFPKG LKVLLIESDA CSAVEMRLKL EEMDYIVSIF CNENEALSAI 60 SNKSECFHVA IVEVNTQNSS GIFKFLETAN DLPTIMISDN NCISTMMKCI ALGAVEFLQK 120 PVSDDKLQNI WQHVVHKAFN AGGKDVSEAL KPVKESLISM LQLPFGNAET GKQASVEAEQ 180 ENNQDLLSGC DKYPAPSTPQ LKQGERSLDD GDCQDQANFS MEQDSAEQDG ECKSVETTCG 240 NSIFECTALG SPASGEDAVK EEHESTNCCR TEINTTTCYE GKDRPSNKTS NAAGLNRSSA 300 VRNTCGIKAS KKRSKVDWTP ELHKKFVQAV EQLGIDQAIP SRILELMKVE GLTRHNVASH 360 LQKYRMHRRH ILPKENERRW PHPGGSAQRN YYPHKPVMAF PPYHPNHTIP GGQVYPAWIP 420 PGTYTGGIHI WGSPYYPGWQ VPNESWYWKP YSMTHADAWG CPVMPQTVGS YPQFAQQTAP 480 DFQTTIEMQY TGSTLLNPSD LHAAEEVIDQ VVKEAISKPW LPLPLGLKPP STECVLNELS 540 RQGISKIPPH TKAPNIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-150 | ARR-B family protein |