PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027083454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 333aa MW: 37296 Da PI: 6.3869 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 31.8 | 3.7e-10 | 44 | 81 | 2 | 39 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39 Fl k+y+i++++e++++isws++g+sfvv+d+++fa + XP_027083454.1 44 FLLKVYDIVKNPEIDSIISWSSSGTSFVVWDPHRFAAE 81 9**********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGTDVSESSS NAIVTAAVAV STTPLAKEGY ANGASSRVRA PPPFLLKVYD IVKNPEIDSI 60 ISWSSSGTSF VVWDPHRFAA EGFRKINWDR LEFQNAWFQK GKKSWLKKIK RRIQGTQNAH 120 LRKPLEIEGQ LSLSREQKKF ESLMQEHDTL KVETMKLKDM EANLVKEMET LEKQAQCITS 180 KQQNMLKYMI HEVLIRKKEM QSNDAANDQG SGGRQSIESS VELLYEGGTS HGSQKNSPRA 240 QSGTGKTFSN VDLSTAIQEE EDCTVSMGKF SNFYTAVYSS LEKQLMDDIS CENVAEEKRA 300 NLQQNDVIPL EDLIEGPADW NEFAKGIGNK ARS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 112 | LKKIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 4e-16 | HSF family protein |