PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027083454.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 333aa    MW: 37296 Da    PI: 6.3869
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027083454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind31.83.7e-104481239
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS
    HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39
                    Fl k+y+i++++e++++isws++g+sfvv+d+++fa +
  XP_027083454.1 44 FLLKVYDIVKNPEIDSIISWSSSGTSFVVWDPHRFAAE 81
                    9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGTDVSESSS NAIVTAAVAV STTPLAKEGY ANGASSRVRA PPPFLLKVYD IVKNPEIDSI  60
ISWSSSGTSF VVWDPHRFAA EGFRKINWDR LEFQNAWFQK GKKSWLKKIK RRIQGTQNAH  120
LRKPLEIEGQ LSLSREQKKF ESLMQEHDTL KVETMKLKDM EANLVKEMET LEKQAQCITS  180
KQQNMLKYMI HEVLIRKKEM QSNDAANDQG SGGRQSIESS VELLYEGGTS HGSQKNSPRA  240
QSGTGKTFSN VDLSTAIQEE EDCTVSMGKF SNFYTAVYSS LEKQLMDDIS CENVAEEKRA  300
NLQQNDVIPL EDLIEGPADW NEFAKGIGNK ARS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106112LKKIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-16HSF family protein