PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027083369.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 483aa MW: 52561.6 Da PI: 4.8023 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.5e-12 | 375 | 417 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_027083369.1 375 MAERRRRKKLNDRLYMLRSIVPKiS------KMDRASILGDAIEYLKEL 417 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MVSTSHSPLS PQAFSLCPPV SFPASSITAE MLPSSNATAT ATATATANTN SALWTQPEET 60 EAASSLSWSA HPRIAAATAA EEETCKAHQE INAVAAATAA STLSKPMLGT DWFINSAQDF 120 KATLSNDMAF PSNPSFETTA HYQNFYSQPS SSSSYFPPNS YLSSLFSLIS SDPVEQNGLL 180 ENNSTNFFLP SDNPYCSDSS SSVLLGNPEL NLPALGLEGL QGYVGNGILF PDKFNYVGLR 240 PLEVLPLGGV EQQQQLLQPQ PQRPTLFQKR AALRNNYLAA DAEKGLMLEG DDGVKSGKKN 300 ERSKRNDVEG ELEDVDDISC LNYDSDEVNL NSNVDRGPNE GNDGAGDKWN VGDINAVTNG 360 DEKGKKKGPP AKNLMAERRR RKKLNDRLYM LRSIVPKISK MDRASILGDA IEYLKELLQR 420 INDLHHELEA TPSGSLLEQT SSFHPLTPTL PTLPCCVKEE LNSSSLPSPK SNQPARFLIY 480 RWR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 365 | 383 | KKKGPPAKNLMAERRRRKK |
2 | 377 | 384 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 5e-42 | bHLH family protein |