PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027083351.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 299aa MW: 32321.8 Da PI: 8.0538

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027083351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.5e-39	43	104	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss XP_027083351.1 43 KEQALNCPRCNSINTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 104 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MDTAQWPQEI VVKPMEEIVV PNGSTTSCSK PGSSLERKVR PQKEQALNCP RCNSINTKFC 60 YYNNYSLSQP RYFCKTCRRY WTEGGSLRNI PVGGGSRKNK RSSSSSSSSS SSVSSSKKLP 120 DLIPPSSHQN PKIHEGQDLN LGFSSSHDFK TITELIQVPN FDSNNKENLT SSSSNSTTTS 180 CHLSALELLT GITPIRGLSS FVPMPITTDP TVVYSSSGGF QLPEFKPSLS FSLDGLGSSG 240 GYVNLHGVPE SSGRPLFPFE DLKQVSGTTS TDVDQQNRDQ HADSTGYWTG VLGGGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	4e-54	Dof family protein