PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027083268.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 157aa MW: 17972.6 Da PI: 9.8318

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027083268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.4	2.2e-31	78	136	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+ +prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+ XP_027083268.1 78 LDDGYKWRKYGQKAVKNCAHPRSYYRCTHHTCNVKKQIQRLSKDTSIVVTTYEGIHNHP 136 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MNQSMQSPQI ASDMDWATIL SSTAVDCEQK PTSPCLSMTS RNAREGDNLD KNKVKPGKTK 60 KSVPPRIAFH TRSTEDILDD GYKWRKYGQK AVKNCAHPRS YYRCTHHTCN VKKQIQRLSK 120 DTSIVVTTYE GIHNHPCEKL METLSPLLKQ LQFLSRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	1e-59	WRKY family protein