PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027083103.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 732aa MW: 83812.3 Da PI: 6.0986

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027083103.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.6	7.6e-22	97	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY++Y+k vGF+vrk+++k+ +++ ++ r +vCs+eg++e++ + ++++ +++ +r+gC a+++vk ek +gk++v+ +++eHnHela XP_027083103.1 97 FYETYSKLVGFTVRKTYTKRD-KDNVVIYRGWVCSREGFAENRINIWDRRQDPKPGSRVGCLASFRVKHEKkSGKYVVSGFVKEHNHELA 185 9*************99998.5556999************9999999*************999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MDAAARSACE RANIDLSDNG NGDGDSGDYN RRNVEDNDIN IDAENINGRK SGGAEPRTGN 60 DNTREVSWVE LDKGLDELTE TEVFKLKFDC DEEAGMFYET YSKLVGFTVR KTYTKRDKDN 120 VVIYRGWVCS REGFAENRIN IWDRRQDPKP GSRVGCLASF RVKHEKKSGK YVVSGFVKEH 180 NHELAAPIAV PYLQPQKRAR TVTVEVGFTK KDIEHVQATS DIHDVDNRFL THSVLAYLCA 240 KNDYDPGLFY KYDGDDEKQL FSIFWADSKS RADYAFFGDV LALNTKFRKN AYGKPFIILA 300 GLNNHYQTTV FGCALLGDET AETYVWLLET FLDAMNHKAP VSVITDGDKA IEEAIEKIFP 360 TSQHRICHWH LYKDAVAIAG DSSFGPDFKK CMEENLNPDE FEVAWIKLMK KYGLQGHPWF 420 EEIYSRRTKW AEAYLREHFF AGLSSIQGHG MNTYFTQFLQ VQLKLHEFVR YFDNALVHLR 480 EDEAKADSES ESTCPAFCTI LRDLERHAAD VFTKSIFLKV REQIMGDAML ILSNKEYLKD 540 EACWVYRFSE YMKPDMIWKV RYHPTIQSLT CSCFKLIKDG LPCCHIISVI KAEQLREFPR 600 CCINKRWMKH ARSEIDSGID IQALNMATEV ARFRILNSTC SEMNYYASQT LQAFNKARNL 660 ISKFTSDVKQ IYNSKGEVDE PSPEVSEDAD GSTSRSGMHD PHGQCDASVV ERPRPDDCSL 720 HSHDQTTSQL RI

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MDAAARSACE RANIDLSDNG NGDGDSGDYN RRNVEDNDIN IDAENINGRK SGGAEPRTGN  60
DNTREVSWVE LDKGLDELTE TEVFKLKFDC DEEAGMFYET YSKLVGFTVR KTYTKRDKDN  120
VVIYRGWVCS REGFAENRIN IWDRRQDPKP GSRVGCLASF RVKHEKKSGK YVVSGFVKEH  180
NHELAAPIAV PYLQPQKRAR TVTVEVGFTK KDIEHVQATS DIHDVDNRFL THSVLAYLCA  240
KNDYDPGLFY KYDGDDEKQL FSIFWADSKS RADYAFFGDV LALNTKFRKN AYGKPFIILA  300
GLNNHYQTTV FGCALLGDET AETYVWLLET FLDAMNHKAP VSVITDGDKA IEEAIEKIFP  360
TSQHRICHWH LYKDAVAIAG DSSFGPDFKK CMEENLNPDE FEVAWIKLMK KYGLQGHPWF  420
EEIYSRRTKW AEAYLREHFF AGLSSIQGHG MNTYFTQFLQ VQLKLHEFVR YFDNALVHLR  480
EDEAKADSES ESTCPAFCTI LRDLERHAAD VFTKSIFLKV REQIMGDAML ILSNKEYLKD  540
EACWVYRFSE YMKPDMIWKV RYHPTIQSLT CSCFKLIKDG LPCCHIISVI KAEQLREFPR  600
CCINKRWMKH ARSEIDSGID IQALNMATEV ARFRILNSTC SEMNYYASQT LQAFNKARNL  660
ISKFTSDVKQ IYNSKGEVDE PSPEVSEDAD GSTSRSGMHD PHGQCDASVV ERPRPDDCSL  720
HSHDQTTSQL RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-90	FAR1 family protein