PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082817.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 357aa    MW: 38377.4 Da    PI: 9.9553
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.21.3e-31269326359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs+fpr+YY+C++  gCp++k+ver+++dp+++++tYegeH+h+
  XP_027082817.1 269 DEYSWRKYGQKPIKGSPFPRGYYKCSTVrGCPARKHVERATDDPTMLIVTYEGEHRHT 326
                     9************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MALDFIGISK INEQVALQEA ASAGLKSMEQ LIRLVSHQQQ MDCRELADST VSKFNRAMSS  60
LNRTGHARFR RGPVNKPQNL GFQSSPVPST STSTSSQFHP CQDLNLSPAP VLAPEPAPAG  120
VPSLGLTLQP QQMLTLDFTK PNLVAPISNQ VDPKATNCEV VAKDSFSISP PMSTSVNSSS  180
FMSSITGEGS VSNGKQGSSS MFLAPAPALS AGKPPIAGKR CREHDRHSDS ASGKTSGSGR  240
CHCKKRKSRV KTIVRVPAIS SKIADIPPDE YSWRKYGQKP IKGSPFPRGY YKCSTVRGCP  300
ARKHVERATD DPTMLIVTYE GEHRHTQGAM QENSTTSAGS GGTLVVFEST GYKEQRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-104WRKY family protein