PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082794.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 314aa    MW: 35198.3 Da    PI: 6.1906
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.6e-30156215159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +C+vkkkv+rs  dp++++ tYegeHnh+
  XP_027082794.1 156 VKDGYHWRKYGQKVTKDNPSPRAYYKCSFApSCQVKKKVQRSVGDPSILIATYEGEHNHQ 215
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDTILEEDCL AFDLNMAPAR NTSDSLKPEF DDGHDLVLDE SKSTSGEEQP DILIDQLNQI  60
KSENKKLKEM LIDLSENYHI LQSHFIDLVQ KYSGDELPKS RKRMFEAENS FNTHTNDGHE  120
DSVLEEGGSP KRPREIRTNI SRVHVRVDLS DTSLVVKDGY HWRKYGQKVT KDNPSPRAYY  180
KCSFAPSCQV KKKVQRSVGD PSILIATYEG EHNHQHPLNA ETLVSSAHGA ASAAFSPGLK  240
CFEFSSRPKE TVDFTNHGLC AKFQRSVSEI GSNCIEQLMV EQIVSSLTRN PSFTTALATA  300
ISGRLLSHDS DQKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-61WRKY family protein