PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082793.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 316aa    MW: 35439.6 Da    PI: 6.1906
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.7e-30158217159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +C+vkkkv+rs  dp++++ tYegeHnh+
  XP_027082793.1 158 VKDGYHWRKYGQKVTKDNPSPRAYYKCSFApSCQVKKKVQRSVGDPSILIATYEGEHNHQ 217
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDTILEEDCL AFDLNMAPAR NTSDSLKPEF DDGHDLVLDE SKSTSGEEQL QPDILIDQLN  60
QIKSENKKLK EMLIDLSENY HILQSHFIDL VQKYSGDELP KSRKRMFEAE NSFNTHTNDG  120
HEDSVLEEGG SPKRPREIRT NISRVHVRVD LSDTSLVVKD GYHWRKYGQK VTKDNPSPRA  180
YYKCSFAPSC QVKKKVQRSV GDPSILIATY EGEHNHQHPL NAETLVSSAH GAASAAFSPG  240
LKCFEFSSRP KETVDFTNHG LCAKFQRSVS EIGSNCIEQL MVEQIVSSLT RNPSFTTALA  300
TAISGRLLSH DSDQKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-61WRKY family protein