PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027082009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 359aa MW: 40093.3 Da PI: 5.5783 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.8 | 2.6e-29 | 132 | 192 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs++dp+++eitY+g+H ++ XP_027082009.1 132 DDGYSWRKYGQKDILGAKYPRSYYRCTYRhmrNCWATKQVQRSDDDPTLFEITYKGTHVCN 192 8**************************99999**************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MEYGSSWDYY TLVNELTQGM EQAKQLRVHL SSGYMEPQDL LLQRILSSYE KALSILKWNG 60 GGSVGQSQPT PLASGAPESS ISVEGSPQNE EAKNNFNDYQ DLRDVSKKRK TQPTWTEQVR 120 VSPENGLEGP ADDGYSWRKY GQKDILGAKY PRSYYRCTYR HMRNCWATKQ VQRSDDDPTL 180 FEITYKGTHV CNTATSISVP QHPSPAKQEF KHSYNHNNHQ QPQQPNQIVM NFRANLRVNT 240 GDSEAKEIVS PFSFPSATHM DDESQLFPMS ALVDENILGT YSPSFVSPAT SGSNYFSMSP 300 CHMANLGRIK NLHGSESDLT EIISATASAT NSPIAGLDFS IDSVELDPNF PFNAPGFFT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 110 | LRDVSKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 3e-65 | WRKY family protein |