PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027081654.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 590aa MW: 65877.1 Da PI: 5.5855

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027081654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.9	1.7e-52	9	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+evd++k+ePwdLp+ +k+++ ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++ XP_027081654.1 9 LPLGFRFRPTDEELINHYLRLKINGRHDEV-QVIPEVDVCKWEPWDLPQlsVIKTDDPEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIK 102 699**********************999.99**********95457888889********************************* PP NAM 94 sk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++l+g+kktLvf++grapkge+t+W+mheyr+ XP_027081654.1 103 SHrsspssnsSTHLIGMKKTLVFHRGRAPKGERTNWIMHEYRA 145 98666666555555*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MGVVSTESLP LGFRFRPTDE ELINHYLRLK INGRHDEVQV IPEVDVCKWE PWDLPQLSVI 60 KTDDPEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSHRSSPSS NSSTHLIGMK 120 KTLVFHRGRA PKGERTNWIM HEYRATEPDL DGTASGQAAY VLCRLFHKPD EKADSSKYDE 180 VEPSGSSPNT VKSSPDDASS DLFQERLILD MQVRKQPAGI ERWLTDKSDD VTSNSLLHVE 240 SCTSDVEDHL IEAAITEVYP TTGGHPMCHE SRDGLDCKVF SPLVSQNHTE IGCPDSPFAD 300 DFGCNQKGMH FQDGTSEQDV SLTELLDVLQ NYDAYPCKES TSEKFLYVGS RSMLPDQLHE 360 GPAGNCNPRD WGAFGKAGED MVIEQTRTCP RSFQSQAPIR DADSRLSNDG ASHDHYADPV 420 SLGGDHQEGT GIKIHRRQAS NRPGCENLAK QGTAARRFRL QVDSAPIPIH DGKYSRAKSF 480 SNEEQDERSV TTEDDEYSES SCTSNEPEGG SSSSESGTSA RKFKAGLALT NKEADEKDKV 540 KWKKFLLRPP GDSSGTGSLT VYGVSMYLVM VLFILFVFLW KCPNFFALHI

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MGVVSTESLP LGFRFRPTDE ELINHYLRLK INGRHDEVQV IPEVDVCKWE PWDLPQLSVI  60
KTDDPEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSHRSSPSS NSSTHLIGMK  120
KTLVFHRGRA PKGERTNWIM HEYRATEPDL DGTASGQAAY VLCRLFHKPD EKADSSKYDE  180
VEPSGSSPNT VKSSPDDASS DLFQERLILD MQVRKQPAGI ERWLTDKSDD VTSNSLLHVE  240
SCTSDVEDHL IEAAITEVYP TTGGHPMCHE SRDGLDCKVF SPLVSQNHTE IGCPDSPFAD  300
DFGCNQKGMH FQDGTSEQDV SLTELLDVLQ NYDAYPCKES TSEKFLYVGS RSMLPDQLHE  360
GPAGNCNPRD WGAFGKAGED MVIEQTRTCP RSFQSQAPIR DADSRLSNDG ASHDHYADPV  420
SLGGDHQEGT GIKIHRRQAS NRPGCENLAK QGTAARRFRL QVDSAPIPIH DGKYSRAKSF  480
SNEEQDERSV TTEDDEYSES SCTSNEPEGG SSSSESGTSA RKFKAGLALT NKEADEKDKV  540
KWKKFLLRPP GDSSGTGSLT VYGVSMYLVM VLFILFVFLW KCPNFFALHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-124	NAC family protein