PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027080471.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 389aa    MW: 43871.9 Da    PI: 4.4536
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027080471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1149.7e-36491402102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+++++ed++++++isws+  nsfvv+d+++f++++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F  g+k+ll++
  XP_027080471.1  49 FLTKTFDMVEDPSTDSVISWSKARNSFVVWDSHKFSTSLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANECFLGGQKHLLKT 134
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+++
  XP_027080471.1 135 IRRRRN 140
                     ***986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MENVTIKIEE EEEGFVFPFS EGGSTGAAAG SSSSPRPMEG LHDMGPPPFL TKTFDMVEDP  60
STDSVISWSK ARNSFVVWDS HKFSTSLLPK YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA  120
NECFLGGQKH LLKTIRRRRN VIPSITQQEG GGPCVELGHY DLEEEIERLK SDRNSLMAEV  180
FKLKQQQQTA RDHVMAMDER LKGTEKKQQQ TMSFLARAFS NPTFLQPYVD RHRQRQEQQR  240
IQIGHKRRLT MTPSVENLQE VASIAADADQ LLNDSGGEQE LVNMQREMET LLFTAALDDE  300
PSSIVNLNSP SIPTSAANVD PVAEHIWEEL LTGDLVTENE AEVVLLGDQP EADVEVEDLV  360
AETPEWGEGF SDLVDQMGYL IAKPDDTSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-110HSF family protein