PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027079935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 345aa MW: 37734.9 Da PI: 4.7884 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 115.5 | 3.4e-36 | 33 | 124 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++elisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k ll++ XP_027079935.1 33 FLTKTYQLVDDPSIDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRD 118 9*****************************************************************99.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_027079935.1 119 IQRRKI 124 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MAPMPVEQAG ESPTGGGGGG GGGESQRTLP TPFLTKTYQL VDDPSIDELI SWNEDGTTFI 60 VWRPAEFARD LLPKYFKHNN FSSFVRQLNT YGFRKVVPDR WEFANDCFRR GEKGLLRDIQ 120 RRKISPAAPS PVVATPPAAV IANAQAVVTV AVPPPMRVVS PANSGDEQVV SSNSSPVATT 180 VLPTTCTTTP EILEENERLR KENAQLHREL NRLRGLCGNI YNLMSNYAGN QAETSGGELP 240 EERALDLMTG RRVTVEMDGG GAAGGGAVKA EEEEEEVSPR LFGVSLGVKR VRRSDDEDNE 300 RQGRDHKEAD ASEGKSEPSD CRVDNHRDDQ AWLDISIRRK SEGES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11660.1 | 1e-88 | HSF family protein |