PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027079655.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 355aa MW: 38236.2 Da PI: 10.053 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.8 | 1.7e-31 | 267 | 324 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs+fpr+YY+C++ gCp++k+ver+++dp+++++tYegeH+h+ XP_027079655.1 267 DEYSWRKYGQKPIKGSPFPRGYYKCSTVrGCPARKHVERATDDPTMLVVTYEGEHRHT 324 9************************9888****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MALDFIGISK INEQVALQEA ASAGIKSMEQ LIRLVSHQQQ MDCRELADST VSKFNRAMSS 60 LNRTGHARFR RGPVNKPQNL GFQSSPVPST STSSQFHPCQ DLNLSPAPVL APEPAPAGVP 120 SLGLTFQPQQ MLTLDFTKPN LVAPISNQVD PKVTNCEVVA KDSFSISPPM STSVNSSSFM 180 SSITGEGSVS NGKQGSSSMF LAPAPALSAG KPPIAGKRCR EHDRHSDSAS GKTSGSGRCH 240 CKKRKSRVKT IVRVPAISSK IADIPPDEYS WRKYGQKPIK GSPFPRGYYK CSTVRGCPAR 300 KHVERATDDP TMLVVTYEGE HRHTQGAMQE NSTTSAGSGG TLVVFESTGY KQQRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.2 | 1e-104 | WRKY family protein |