PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027079655.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 355aa    MW: 38236.2 Da    PI: 10.053
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027079655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.81.7e-31267324359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs+fpr+YY+C++  gCp++k+ver+++dp+++++tYegeH+h+
  XP_027079655.1 267 DEYSWRKYGQKPIKGSPFPRGYYKCSTVrGCPARKHVERATDDPTMLVVTYEGEHRHT 324
                     9************************9888****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MALDFIGISK INEQVALQEA ASAGIKSMEQ LIRLVSHQQQ MDCRELADST VSKFNRAMSS  60
LNRTGHARFR RGPVNKPQNL GFQSSPVPST STSSQFHPCQ DLNLSPAPVL APEPAPAGVP  120
SLGLTFQPQQ MLTLDFTKPN LVAPISNQVD PKVTNCEVVA KDSFSISPPM STSVNSSSFM  180
SSITGEGSVS NGKQGSSSMF LAPAPALSAG KPPIAGKRCR EHDRHSDSAS GKTSGSGRCH  240
CKKRKSRVKT IVRVPAISSK IADIPPDEYS WRKYGQKPIK GSPFPRGYYK CSTVRGCPAR  300
KHVERATDDP TMLVVTYEGE HRHTQGAMQE NSTTSAGSGG TLVVFESTGY KQQRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-104WRKY family protein