PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027079190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 363aa    MW: 39955.4 Da    PI: 9.6464
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027079190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31290347359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_027079190.1 290 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 347
                     99************************988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MAVELMLGYR NTTDNFVTQL EESGAVQEAA CSGLESVEKL IQLFSRKEQK GTRTISSEQQ  60
NSSMEIEMDC KVETDAAVTK FKKVISLLGR TRTGHARFRR GPVPVATNPV PLKDCSTEEV  120
ADTKVYCPTP IQQIPPPLHD FHLRNRNHRV ISHQSDVNQV TSTFSQTPTG GVVVEKREPI  180
SRSISFSYSP AISHANSFIS SLTGETDSKQ LISSSSAFQL TNLSQVSSAG KPPLSSSSSF  240
KRKCISENGI SGKCSPSAGR CHCSKKRKLR LKRVIRVPAI SMKMADIPPD DYSWRKYGQK  300
PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPTMLIVTY EGEHNHSLSV AETNTAALIL  360
ESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.17e-81WRKY family protein