PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027078687.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 180aa    MW: 20223.2 Da    PI: 10.5464
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027078687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.56.4e-282680155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kpr+rWtp LH++F++av++LGG+ +AtPk+i+  m+++ +t +h+kSHLQkYRl
  XP_027078687.1 26 KPRIRWTPGLHNCFIKAVDRLGGPFEATPKEIMTQMDIPEVTSSHIKSHLQKYRL 80
                    79****************************************************8 PP
2Myb_DNA-binding40.56.3e-133079348
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     rWT+ ++  +++av +lGg+   t+k I+  m     t  ++ks++qky+
   XP_027078687.1 30 RWTPGLHNCFIKAVDRLGGPfeaTPKEIMTQMDiPEVTSSHIKSHLQKYR 79
                     9*********************************778************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MAAKGNDTKI LHTSDRQLQV AENTRKPRIR WTPGLHNCFI KAVDRLGGPF EATPKEIMTQ  60
MDIPEVTSSH IKSHLQKYRL RMGCNSGTAA DSTVARKAAT NTMFEADDGS NTAGWHTNEI  120
QTMWGNIKCN VMGTKTSIQA PDIKGEKGKR EQKMKMFSIW KDKMGRRSKV IIISNVHYST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.35e-19G2-like family protein