PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027078379.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GeBP
Protein Properties Length: 412aa    MW: 45436.3 Da    PI: 5.243
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027078379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731192.5e-37188285298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskki 95 
                     lfqrlwse+Dei++L+G++d+ ak++++p +d++af ef+kk+i+ +vsk+ql +KirrLKkK++++ ++ +k +ke +fsk+h+qk++e+skk+
  XP_027078379.1 188 LFQRLWSEDDEIAILKGMLDYSAKKKADPINDLNAFLEFIKKNIHTDVSKTQLQDKIRRLKKKYENNAEReKKGNKELTFSKPHEQKAYEFSKKV 282
                     79******************************************************************9955667899***************** PP

          DUF573  96 Wgs 98 
                     Wg+
  XP_027078379.1 283 WGK 285
                     *95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MAKPRETAKP DPPVESEEEE ESGEEEEEGS SEESESQPEN EPSEKKTAST PAPATKKPES  60
ATPKTQPTSA AAAASSSDES EDEESGSDTD SDTETPSEKP DPSIKPIASK PMDGPQKTTT  120
TAKKPRSKPN ALGPTSPAKS TTGAGAKRTA SAAGSDEGKD AKRSKKKPEA EAESSERKGN  180
SNDDSRRLFQ RLWSEDDEIA ILKGMLDYSA KKKADPINDL NAFLEFIKKN IHTDVSKTQL  240
QDKIRRLKKK YENNAEREKK GNKELTFSKP HEQKAYEFSK KVWGKEKNGD GEENVESTKA  300
NGTAVRKSRS RSAVVGMTPK VDEVEEKLKE VKDLVGEKNV VEGLKNESFG PTDSLRIEEW  360
VLKNGAHLIK DAKKRAELEE KWRELKVKEI ELLARRSELM AEQSNLVLEG LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.11e-30GeBP family protein