PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027078364.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 360aa    MW: 39962.1 Da    PI: 5.6039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027078364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.2e-21167217256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_027078364.1 167 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 217
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MKALEPFMKG ASSLPSSPTT TSSPFSSSSS SLSPPSTSSS SSCSSYYPFD SSSFSSEPNM  60
YSSFTSYVPS TAHMFSQGLS SFDEMGFDEQ SGGGSIGLNH LTPYQILEVE AQIKLQNQQQ  120
QYLAAQSLQN YSSTRQLQHQ NHSHLSFLGP KPVHMKQVGT PPKPAKLYRG VRQRHWGKWV  180
AEIRLPKNRT RLWLGTFDTA EEAALAYDKA AYKLRGEFAR LNFPNLRHQL SQDFGDFKPL  240
HSSVDAKLEA ICQSLADSQK QGNTGEQQQK KVGVQTIPKV ENTFDDSLNS EYFYPGNEGV  300
KVEETSSSLS PSRSDETSSL EMSSPESDIT FLDFAEPTFD QSENFLLQKY PSVEIDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.19e-57ERF family protein