PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027078146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25723.6 Da PI: 9.2735 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.9 | 3.1e-12 | 52 | 98 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr llPk K +Ka+ L ++v+++++L XP_027078146.1 52 KSHSEAERRRRKRINGHLATLRNLLPKT-----IKADKASLLAEVVRCLREL 98 79*************************8.....69*************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MHTLPSFYEV GSCSESYNFL HEILNSREQL HLDNSNVNAI SMAEAKAVAA NKSHSEAERR 60 RRKRINGHLA TLRNLLPKTI KADKASLLAE VVRCLRELKK STEELSATEG DDQSNTAMKL 120 MFPSETDELK LCYDDGDSRT IKARLCCEDR PEMMIELKRA LNAVKAKVVK AEMATVGGRT 180 KTVLWLQASA AGEEGLATIR RALKVVVDRS IMLSTPGQAL PGNKRPRLYH C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 2e-33 | bHLH family protein |