PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027077713.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GeBP
Protein Properties Length: 324aa    MW: 36732.3 Da    PI: 4.9462
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027077713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57387.71.5e-2756150297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     +f+r+w+e Dei +LqGl+ +++++  s   d++ fy  +++ +s  ++ksql+eK+rrL+kKf+  ++++++g ++sf ++hd+  fe+sk++W
  XP_027077713.1  56 KFHRIWTEPDEIRFLQGLLHCASDNL-SFPRDLNIFYARFSDTMSQPYTKSQLSEKLRRLRKKFRVISSRISKGLDQSFLSPHDRALFEISKRLW 149
                     699******************77765.7778**************************************************************** PP

          DUF573  97 g 97 
                     +
  XP_027077713.1 150 H 150
                     7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDSTLAPAPP IKASASKLPI KRKTPDPNPS SHSNPDPDPK YSSPVPDGDP RPPPFKFHRI  60
WTEPDEIRFL QGLLHCASDN LSFPRDLNIF YARFSDTMSQ PYTKSQLSEK LRRLRKKFRV  120
ISSRISKGLD QSFLSPHDRA LFEISKRLWH PDYADTSPFG GVSGGKATKS DLVGVEVSFL  180
PEILSGLDPN EVENFELKWE KSDNVVEGVD FGDMGFDGEV KLSEVNVEFE KEEEEADEMG  240
WRNGGEMGAE EVAVAKAVID AFDKSLEEVR MGVVKDGGSL NGCEQEEGKR WDFDRRWKEQ  300
RVAELDVLTR RMRLVFEQSL LRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-19GeBP family protein