PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 324aa MW: 36732.3 Da PI: 4.9462 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 87.7 | 1.5e-27 | 56 | 150 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +f+r+w+e Dei +LqGl+ +++++ s d++ fy +++ +s ++ksql+eK+rrL+kKf+ ++++++g ++sf ++hd+ fe+sk++W XP_027077713.1 56 KFHRIWTEPDEIRFLQGLLHCASDNL-SFPRDLNIFYARFSDTMSQPYTKSQLSEKLRRLRKKFRVISSRISKGLDQSFLSPHDRALFEISKRLW 149 699******************77765.7778**************************************************************** PP DUF573 97 g 97 + XP_027077713.1 150 H 150 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MDSTLAPAPP IKASASKLPI KRKTPDPNPS SHSNPDPDPK YSSPVPDGDP RPPPFKFHRI 60 WTEPDEIRFL QGLLHCASDN LSFPRDLNIF YARFSDTMSQ PYTKSQLSEK LRRLRKKFRV 120 ISSRISKGLD QSFLSPHDRA LFEISKRLWH PDYADTSPFG GVSGGKATKS DLVGVEVSFL 180 PEILSGLDPN EVENFELKWE KSDNVVEGVD FGDMGFDGEV KLSEVNVEFE KEEEEADEMG 240 WRNGGEMGAE EVAVAKAVID AFDKSLEEVR MGVVKDGGSL NGCEQEEGKR WDFDRRWKEQ 300 RVAELDVLTR RMRLVFEQSL LRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 1e-19 | GeBP family protein |