PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077254.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 402aa MW: 45257.8 Da PI: 4.4397

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	99.5	3.1e-31	183	277	5	98
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98 r+w eeD i lLq +idfk+++g++ps+++ afy+f++++++f++s++q+ eKirrL+ Kf ++++k k g++ +f+k h+ ++f+lskkiWg+ XP_027077254.1 183 RVWGEEDVIDLLQSMIDFKDEKGVDPSSNMPAFYDFARGKLQFEFSNTQIYEKIRRLRIKFFNNMEKyEKGGEDLVFHKRHEAETFDLSKKIWGK 277 9***************************************************************988899*******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MAPKNPISDQ QPPPPELEES SSEEEESVSN KHIPPPEPET MKESSEQEEE ESSEEEGEEE 60 GSEEEEEEVG ESDVEEEQDK QKSSQILPDV QKQTTPPPQF PAYSGKEGEE DEESENSIDS 120 PSASDFRIKV VTPPKPTSKD SKSISKHPFE AEKDDESDLR GKKKAKVNAE EFRKDSSSGG 180 AGRVWGEEDV IDLLQSMIDF KDEKGVDPSS NMPAFYDFAR GKLQFEFSNT QIYEKIRRLR 240 IKFFNNMEKY EKGGEDLVFH KRHEAETFDL SKKIWGKGGD GMINKGVDKN VDGKSNNGYN 300 GKAKKGGKTV RSVDKNAVKE LGKDDHEGDF ESKYPFLSHS IDMDVGGGFL RENISLIGDA 360 KAKDLEGKWK KFREAEVEVL LMKMDLMKEH TKLVLEGMKE SN

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MAPKNPISDQ QPPPPELEES SSEEEESVSN KHIPPPEPET MKESSEQEEE ESSEEEGEEE  60
GSEEEEEEVG ESDVEEEQDK QKSSQILPDV QKQTTPPPQF PAYSGKEGEE DEESENSIDS  120
PSASDFRIKV VTPPKPTSKD SKSISKHPFE AEKDDESDLR GKKKAKVNAE EFRKDSSSGG  180
AGRVWGEEDV IDLLQSMIDF KDEKGVDPSS NMPAFYDFAR GKLQFEFSNT QIYEKIRRLR  240
IKFFNNMEKY EKGGEDLVFH KRHEAETFDL SKKIWGKGGD GMINKGVDKN VDGKSNNGYN  300
GKAKKGGKTV RSVDKNAVKE LGKDDHEGDF ESKYPFLSHS IDMDVGGGFL RENISLIGDA  360
KAKDLEGKWK KFREAEVEVL LMKMDLMKEH TKLVLEGMKE SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-20	GeBP family protein