PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 718aa MW: 81073.2 Da PI: 5.42 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 381.8 | 8.4e-117 | 343 | 714 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+av+ d+ a++lL+++++++sp+gdp++Rla +f++AL+arla+++++ly+al+++++s ++ l a+ ++ e++P+ ++s+ XP_027077214.1 343 LRDLLTRCAHAVAIYDNWTANELLKQIRQHSSPYGDPTERLAYCFANALEARLAGMGTTLYSALTTTRAS---AADILRAYGAYLEICPFQRMSN 434 6899************************************************************999998...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + aN+ I + +++ +r+HiiDf+i +G+QWp+L++ ++ Rp+gpp+lRiTgv+ p++g +e++eetg rLa++A++++vpfefn+ vakr+++ XP_027077214.1 435 IFANKSIAKQTSTVTRIHIIDFGILYGFQWPCLIHGISLRPGGPPKLRITGVDLPQPGfrPAERIEETGGRLANYAKRFNVPFEFNA-VAKRWDT 528 *********************************************************9*****************************.8****** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++ e+L+++++E+++Vn+ ++l +++de+v ++s+rd+v++l+k+++P+++v+ + ++++ F++rf eal+++s+lfd++ea+lpre+++r+ XP_027077214.1 529 ITAEDLAIDEDEMVVVNCLYRLRNVPDETVIQSSPRDSVMNLIKKINPEMFVHGVLNGTYGAPFFVTRFKEALYHFSSLFDMFEATLPREDQNRS 623 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + E+e++gre++nv+aceg+er+er ++++W+ r ++aGFk++pl+++++ ++++ ++ ++++ + ++ + +++++gWk+r ++++S+W+ XP_027077214.1 624 MFEKEVIGREVMNVIACEGTERIERPDSYKQWQVRNQRAGFKQLPLNSEIMREVRAKVKSYYNKDFLIDADGAWMLQGWKGRVIYALSCWK 714 **************************************************************999*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 718 aa Download sequence |
MDTLFRGDGH SINSANEFPQ LDFDQQHLLS QGNLVNGCQF DHLFNNVTGL SKLSSHLDIN 60 STPCEVGDDS PVEGDYFDGV FKYLQRMLME EDDLLDKPCM LQDCLALQAA EKSFYEVLNE 120 NQPSTLSRSP SPTTTFGGQT FDSPIDDFAE IWPNHVIDHV VPHQTIQYNF QPTCIPGDSL 180 DLSVDYLVDT CLSPSQTIQS STNINTHVMP QLGEDVEECR IVKFYQNKMP SILAAAGEQS 240 SHHQSRKKSA NHDREGGDHD EDRPTKHFAS HTDEIANTDD YDNALLCPAR NPNFYGESPS 300 RGGIESPDLE GTKKQQYVPP TTAKRGRPRA GQKRDSIREL VDLRDLLTRC AHAVAIYDNW 360 TANELLKQIR QHSSPYGDPT ERLAYCFANA LEARLAGMGT TLYSALTTTR ASAADILRAY 420 GAYLEICPFQ RMSNIFANKS IAKQTSTVTR IHIIDFGILY GFQWPCLIHG ISLRPGGPPK 480 LRITGVDLPQ PGFRPAERIE ETGGRLANYA KRFNVPFEFN AVAKRWDTIT AEDLAIDEDE 540 MVVVNCLYRL RNVPDETVIQ SSPRDSVMNL IKKINPEMFV HGVLNGTYGA PFFVTRFKEA 600 LYHFSSLFDM FEATLPREDQ NRSMFEKEVI GREVMNVIAC EGTERIERPD SYKQWQVRNQ 660 RAGFKQLPLN SEIMREVRAK VKSYYNKDFL IDADGAWMLQ GWKGRVIYAL SCWKPAGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 1e-174 | GRAS family protein |