PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077188.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 360aa MW: 40887.2 Da PI: 7.1107

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.5	4.4e-11	76	106	4	34
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 +k+ rr+++NReAAr+sR+RKka++++Le+ XP_027077188.1 76 DKVLRRLAQNREAARKSRLRKKAYVQQLENS 106 7999*************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MHSTTTQYVA SRRMGLYEPM HPIGMWGDFK GNGCPNASAS TILQVETNLD NQSEDTSHGT 60 LGTPSKYDQE ASKPVDKVLR RLAQNREAAR KSRLRKKAYV QQLENSRLRL VQLEQELDRA 120 RQQGLYAAGG LDISQLTCSG ALNSGSAAFE VEYGRWVEEQ NRQVNELRNA LHSHISEEEL 180 RLLVDGGINH YFDLFRMKET AAKADVFYLM SGMWKTSVER LFLWIGGFRP SDLLKILSQH 240 IQPLSDEQVL NVYHLTHACQ QAEDALSQGM DKLHQFLAES VCRAQLREVS YPQMEAAIEN 300 LEALERFVKQ ADHLRQATLQ QMSGILTIRQ SARGLLAMGD YFERLRTLSS LWTKRNSEPA

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MHSTTTQYVA SRRMGLYEPM HPIGMWGDFK GNGCPNASAS TILQVETNLD NQSEDTSHGT  60
LGTPSKYDQE ASKPVDKVLR RLAQNREAAR KSRLRKKAYV QQLENSRLRL VQLEQELDRA  120
RQQGLYAAGG LDISQLTCSG ALNSGSAAFE VEYGRWVEEQ NRQVNELRNA LHSHISEEEL  180
RLLVDGGINH YFDLFRMKET AAKADVFYLM SGMWKTSVER LFLWIGGFRP SDLLKILSQH  240
IQPLSDEQVL NVYHLTHACQ QAEDALSQGM DKLHQFLAES VCRAQLREVS YPQMEAAIEN  300
LEALERFVKQ ADHLRQATLQ QMSGILTIRQ SARGLLAMGD YFERLRTLSS LWTKRNSEPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.2	1e-163	bZIP family protein