PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 220aa MW: 25519.6 Da PI: 6.05 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 59.2 | 1.1e-18 | 84 | 175 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 fqr+w +Dei lL +id +++ ++p + d f ++ ++ +sf+ ++ ql eKir+L++K+kk+ k+ ++ +++ h+ fels+++W XP_027077161.1 84 PFQRIWMRDDEIDLLHIMIDRMEQNAAQPRSYEDIFSHIREHPLSFQPTRIQLKEKIRHLREKYKKNAKE----PQKFMKSYHEVRLFELSSQVW 174 69*******************999999999999999999999************************9999....888999*************** PP DUF573 97 g 97 g XP_027077161.1 175 G 175 8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MSLGESVYEY NSDNKKIMGI IHEAKLQESS HEDDTNCGKP LDRKLSNSSM NVPVTEEDVK 60 DAECFSKLDS SNNVDSRGKV QEKPFQRIWM RDDEIDLLHI MIDRMEQNAA QPRSYEDIFS 120 HIREHPLSFQ PTRIQLKEKI RHLREKYKKN AKEPQKFMKS YHEVRLFELS SQVWGVEQSD 180 FLQSSGTIKG NCHSKAKEIL EDEKDTFAVT SNSALHEQVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 3e-17 | GeBP family protein |