PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 461aa MW: 52277.8 Da PI: 4.7128 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 72.9 | 5.9e-23 | 184 | 275 | 7 | 97 |
DUF573 7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 ws++D lL+ +i+fk+++g +ps +++af+++vk++ ++s+sq+ eKirrLK K + v+k k g+ ++ ++++ +if+lsk+iWg XP_027077159.1 184 WSDDDVKCLLRSIIKFKTEKGLNPSTNMNAFCKYVKGKFGREFSRSQIYEKIRRLKSKGFNSVEKfEKGGDCFVHFNANELEIFKLSKSIWG 275 **********************************************************8888888355666667779999***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence |
MESKKPTTHY PPPSTQSEEE ESEKGQDEES REGEEGSEEE SKSEHKEESE EEERSEGEEF 60 EVEENIHESP TQLDQMFSAQ KEIITPYQSS SDSGEEEDKE GGDDEELEIS THSPTSDFMI 120 KLIPPTKFTS KGSSSTSKRP LEDQGDDQKH LRSEKKAKGK ADEPNKQEPS AISAAIGEGA 180 GTKWSDDDVK CLLRSIIKFK TEKGLNPSTN MNAFCKYVKG KFGREFSRSQ IYEKIRRLKS 240 KGFNSVEKFE KGGDCFVHFN ANELEIFKLS KSIWGAETGD GTAIDRANET VKSMGKVVSF 300 VKQDKKEEKK KKTNVVKTFF RDDAEDDFQS KYPYLTKSFD VDSWSIMMNA DKIAGQRSFL 360 KENMSLIGHA KAMELEDKWK KLREAEVELL LKRSELMKEH CTLVLEVFDT CNRKLSKPSS 420 AHDGVPDTAE FVDGEDVYEN SAYNILGATF GYLQRLRENY G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 3e-11 | GeBP family protein |