PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027077158.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 749aa    MW: 84240.4 Da    PI: 5.9555
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027077158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS339.36.8e-1043797464373
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                     lL++cA++v+++d++ a++ L++++++as  gdp qRla+ +++AL+arla+++  l  al++++ s   ++++l+a++++  +sP+     + a
  XP_027077158.1 379 LLISCAQFVAADDHRTATEKLKQIRQHASCLGDPHQRLAFILVNALEARLAGTGRDLHVALTSKRIS---TADQLKAYRVYL-CSPLRPTFSFFA 469
                     8***************************************************999999888888887...899999999865.99**999999** PP

            GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     N++Ilea+++++ +Hi+Df+i+ G+QWp+L+q+L++R++gpp+lRiTg++ p++g   +e++++tg+rLak++e+++vpfe++++++++++++++
  XP_027077158.1 470 NEMILEAASRATILHIVDFGITFGFQWPTLIQQLSNRDGGPPMLRITGIDFPQPGfrPAESIQQTGHRLAKYCERFNVPFEYQAIATRNWDKITI 564
                     ******************************************************9*****************************9999******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     eeL++ ++E+laV +++ l+++ d+ v+ e +rd+vL+l++ ++P+++v     a+++++ Fl+rf +al+++ ++fd+++++lpr++ +r+k E
  XP_027077158.1 565 EELKLTRNEVLAVACQFGLKNISDDMVEGECPRDAVLSLIRAMNPDILVTDVLSAQLSGPFFLTRFRDALSFFFTMFDAIDNNLPRKDAQRMKFE 659
                     *********************************************************************************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +e+lg ++ n+vaceg +r+er+et++kW++r ++aGF+++pl+++  k+ +  ++k + + ++++e+  ++++gWk++ + ++S+W
  XP_027077158.1 660 QEFLGTQLLNIVACEGLARVERCETYRKWHARYNRAGFRQLPLNQDLLKELRGKVKKAYHKDFMLDEDGCWMLQGWKGKIISACSCW 746
                     ***********************************************************888************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    
MDHQFLNLNG SGSDGTVVSS LEQSELNFQL QKVWDPVKRF GFNDGIVFGS LDSEPLDPSS  60
FAPFFNVSTE VDFPDEHECY PVLKHINQML MEENLEEQQR MSTDPLALQA AEKSLYEILG  120
KNYPHSPRAT FVTALENNAH TPDVFSESSS NHVANCSDSG SNSAASWPIP EVSELSGKQG  180
HHLVNSCKSS FHTNSVQCLH MLKNSTLCGN GQVASLTDEN LIPSFYSNHE TMMLFKRGLE  240
EGKKFLPSGN QLVVDLDKHT LSLKLELLAE KKKDEVEKLD EISGGRKHQN QDDDDSLRGR  300
SNKQSATSEE EVELSELLDR VLLHADSKGL EAYSDVDVEQ PNGSFKTLSR SKFLHRSRVG  360
MSPEKRLGAE GEALDLFGLL ISCAQFVAAD DHRTATEKLK QIRQHASCLG DPHQRLAFIL  420
VNALEARLAG TGRDLHVALT SKRISTADQL KAYRVYLCSP LRPTFSFFAN EMILEAASRA  480
TILHIVDFGI TFGFQWPTLI QQLSNRDGGP PMLRITGIDF PQPGFRPAES IQQTGHRLAK  540
YCERFNVPFE YQAIATRNWD KITIEELKLT RNEVLAVACQ FGLKNISDDM VEGECPRDAV  600
LSLIRAMNPD ILVTDVLSAQ LSGPFFLTRF RDALSFFFTM FDAIDNNLPR KDAQRMKFEQ  660
EFLGTQLLNI VACEGLARVE RCETYRKWHA RYNRAGFRQL PLNQDLLKEL RGKVKKAYHK  720
DFMLDEDGCW MLQGWKGKII SACSCWIPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-155GRAS family protein