PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027077024.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 159aa    MW: 18753.7 Da    PI: 10.9869
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027077024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000265780123
                    EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                    y C+ Cg+ ++++ +Lk+H r  H
  XP_027077024.1 57 YICSVCGRKCKTHLDLKKHFRQlH 80
                    89*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MALKKVAQHF GNLVDISAYA NRHAFIHLPQ WVVEERRERR RMDILERKGV STPSEPYICS  60
VCGRKCKTHL DLKKHFRQLH ERERQKKLNR MRSLKGKKRQ RFKERFIDGN EKYNEAARTL  120
TSPKVGYGLA SELRRAGVFV KTVEDKPQEN FTNIPKPHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.12e-79C2H2 family protein