PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076832.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 349aa    MW: 38745.7 Da    PI: 7.6863
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-12157202454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h  +Er+RR+++ + f  L  ++P++     +Kl+Ka++L  Ave+Ik+L
  XP_027076832.1 157 DHLLAERKRRKNLSKHFIALSAIVPHL-----EKLDKASVLVGAVEHIKKL 202
                     68899*********************9.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MDVPALNHRW PMMNSIEESV TDNTSFDRSS SSDHGSYPNH PSSGKRKLPH DVSQINSISL  60
KPPVQLNNNG MNSKFIGTSP KPSSSPSTRM ISFGTVNYNL PNYSVKTESE DMMPIGNIGF  120
SSSISPTSFD QESYRALEHG TDPFKRGFSR THLQAQDHLL AERKRRKNLS KHFIALSAIV  180
PHLEKLDKAS VLVGAVEHIK KLDKRVKFFE EEEKKRKQRE ELVVSAMKKS RPICSTATND  240
DASSSGEKTS DDSSCDQELS SAVEVQVKSS GVDMLIKIEC KNHEEILLEF GSLMNKIQLT  300
IKSSSFLQFG DGMLSIGAVA QVNEEFCMTA EVLANKIRQA LANLYDGRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163204RKRRKNLSKHFIALSAIVPHLEKLDKASVLVGAVEHIKKLDK
2164205RKRRKNLSKHFIALSAIVPHLEKLDKASVLVGAVEHIKKLDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-24bHLH family protein