PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027076832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 349aa MW: 38745.7 Da PI: 7.6863 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.4e-12 | 157 | 202 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er+RR+++ + f L ++P++ +Kl+Ka++L Ave+Ik+L XP_027076832.1 157 DHLLAERKRRKNLSKHFIALSAIVPHL-----EKLDKASVLVGAVEHIKKL 202 68899*********************9.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MDVPALNHRW PMMNSIEESV TDNTSFDRSS SSDHGSYPNH PSSGKRKLPH DVSQINSISL 60 KPPVQLNNNG MNSKFIGTSP KPSSSPSTRM ISFGTVNYNL PNYSVKTESE DMMPIGNIGF 120 SSSISPTSFD QESYRALEHG TDPFKRGFSR THLQAQDHLL AERKRRKNLS KHFIALSAIV 180 PHLEKLDKAS VLVGAVEHIK KLDKRVKFFE EEEKKRKQRE ELVVSAMKKS RPICSTATND 240 DASSSGEKTS DDSSCDQELS SAVEVQVKSS GVDMLIKIEC KNHEEILLEF GSLMNKIQLT 300 IKSSSFLQFG DGMLSIGAVA QVNEEFCMTA EVLANKIRQA LANLYDGRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 163 | 204 | RKRRKNLSKHFIALSAIVPHLEKLDKASVLVGAVEHIKKLDK |
2 | 164 | 205 | RKRRKNLSKHFIALSAIVPHLEKLDKASVLVGAVEHIKKLDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 1e-24 | bHLH family protein |