PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076776.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YB
Protein Properties Length: 156aa    MW: 17919.1 Da    PI: 6.6749
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB147.43e-461811797
           NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                    mkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfedyv plk+yl+kyrelegek
  XP_027076776.1  1 MKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVTPLKQYLNKYRELEGEK 81
                    9*****************************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MKKVIPGNGK ISKDAKETVQ ECVSEFISFV TGEASDKCQR EKRKTINGDD IIWAITTLGF  60
EDYVTPLKQY LNKYRELEGE KLNVPKQQQQ QQQHQRLQNH DQNPIMSPYH SVYSSTNLLS  120
QPPFVPSDQT FALPFSQSSI QTQLPQQEHI DSVGHW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.18e-56NF-YB family protein