PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076706.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 153aa    MW: 17620.9 Da    PI: 9.5927
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.61.8e-11117138122
                     ---SS-EEEEEEE--TT-SS-E CS
            WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                     +dDgy+WrKYG+K+vk+s++pr
  XP_027076706.1 117 MDDGYKWRKYGKKMVKNSPNPR 138
                     69*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MDASLCMFPN PNPTAGVMPD ISQHVDHHQH HQTSSEFQFS DYFMMQDYYS FDQDAHLASQ  60
NTVDQYQQNV TSNITVESNH PSATASNMKQ KSGITKKRAV DMGRKVAFRT KSKLDVMDDG  120
YKWRKYGKKM VKNSPNPRCT MLMISSVFLK NWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.17e-15WRKY family protein