PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027076705.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 187aa MW: 21499.9 Da PI: 8.7367

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027076705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.2e-30	100	158	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+Y++C+s gC+vkk+ver+++dp++v++tYeg Hnhe XP_027076705.1 100 MDDGYKWRKYGKKMVKNSPNPRNYFKCSSGGCHVKKRVERDRDDPSYVITTYEGVHNHE 158 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MPDISQHVDH HQHHQTSSEF QFSDYFMMQD YYSFDQDAHL ASQNTVDQYQ QNVTSNITVE 60 SNHPSATASN MKQKSGITKK RAVDMGRKVA FRTKSKLDVM DDGYKWRKYG KKMVKNSPNP 120 RNYFKCSSGG CHVKKRVERD RDDPSYVITT YEGVHNHESP CVVYHLPPMM PMGGFSLQES 180 YTPSSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	9e-42	WRKY family protein