PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027076704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 204aa MW: 23247 Da PI: 8.3199 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.8 | 1.4e-30 | 117 | 175 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+Y++C+s gC+vkk+ver+++dp++v++tYeg Hnhe XP_027076704.1 117 MDDGYKWRKYGKKMVKNSPNPRNYFKCSSGGCHVKKRVERDRDDPSYVITTYEGVHNHE 175 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MDASLCMFPN PNPTAGVMPD ISQHVDHHQH HQTSSEFQFS DYFMMQDYYS FDQDAHLASQ 60 NTVDQYQQNV TSNITVESNH PSATASNMKQ KSGITKKRAV DMGRKVAFRT KSKLDVMDDG 120 YKWRKYGKKM VKNSPNPRNY FKCSSGGCHV KKRVERDRDD PSYVITTYEG VHNHESPCVV 180 YHLPPMMPMG GFSLQESYTP SSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 8e-42 | WRKY family protein |