PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076245.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 96aa    MW: 10331.4 Da    PI: 8.3844
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.81.1e-322582260
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                    ++vrY eC+kNhAa +Gg+avDGC+Efm+s geegt aal CaACgCHRnFHRreve+e
  XP_027076245.1 25 RNVRYGECQKNHAAGVGGYAVDGCREFMAS-GEEGTNAALSCAACGCHRNFHRREVETE 82
                    579**************************9.999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MKKRQVVVKR DESSKNATNS SFTVRNVRYG ECQKNHAAGV GGYAVDGCRE FMASGEEGTN  60
AALSCAACGC HRNFHRREVE TEAVCEGSSP SSLGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.15e-43ZF-HD family protein