PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027076076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 203aa MW: 23507.5 Da PI: 7.1989 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 60.7 | 3.8e-19 | 67 | 158 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 fqr+w +Dei +L +id +++ ++p + d f ++ ++ +sf+ ++ ql eKir+L++K+kk+ k+ ++ +++ h+ fels+k+W XP_027076076.1 67 PFQRIWRRDDEIDILNIMIDRMEQNAAQPRSYEDIFSRIREHPLSFQPTRIQLKEKIRHLREKYKKNAKE----PQKFMKSYHEVRLFELSSKVW 157 69*******************999999999999999999999************************9999....888999*************** PP DUF573 97 g 97 g XP_027076076.1 158 G 158 8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGIIHEAKLQ ESSHEDDTNC GKPLDRKLSN SSMNVPVTEE DVKDAECFSK LDSSNNVVSR 60 GKVQEKPFQR IWRRDDEIDI LNIMIDRMEQ NAAQPRSYED IFSRIREHPL SFQPTRIQLK 120 EKIRHLREKY KKNAKEPQKF MKSYHEVRLF ELSSKVWGVE QSDFLQTSGT IKGNCHSKAK 180 EILEDGKDTF AVTSNSALHE QVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 9e-17 | GeBP family protein |