PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027076071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 237aa MW: 26988.6 Da PI: 6.5273 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 59.2 | 1.1e-18 | 56 | 146 | 5 | 95 |
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 + ws+e lLq +i+fkak+g+++ +d af++f++++ +f++sks + eK+rrLK K+ ++ kk + ++++ ++ + ++++ls++i XP_027076071.1 56 MAWSDEQVTKLLQCMIEFKAKKGVDADADPAAFHQFFEQKFQFRYSKSRVYEKVRRLKMKYCNNLKKFEIVEKKTGISKAELQTLNLSRQI 146 78*****************************************************************988888888888888999999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MASYNPISDH PPLSPQSHDE ENEDEEKGEE DYKAKFTADE PQTDKPSSVS AATTGMAWSD 60 EQVTKLLQCM IEFKAKKGVD ADADPAAFHQ FFEQKFQFRY SKSRVYEKVR RLKMKYCNNL 120 KKFEIVEKKT GISKAELQTL NLSRQISVGS AGAGDFESNY PLLNQSFEVE SRGVMKFGGK 180 TADELSFLKE NMHLIGDDKA KELERKWKTL HAVHFFKSLE LMKEQISLVL EATIGKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 9e-09 | GeBP family protein |