PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027076009.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 339aa MW: 38189.5 Da PI: 4.7914

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027076009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	99.9	2.3e-31	120	214	5	98
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98 r+w eeD i lLq +idfk+++g++ps+++ afy+f++++++f++s++q+ eKirrL+ Kf ++++k k g++ +f+k h+ ++f+lskkiWg+ XP_027076009.1 120 RVWGEEDVIDLLQSMIDFKDEKGVDPSSNMPAFYDFARGKLQFEFSNTQIYEKIRRLRIKFFNNMEKyEKGGEDLVFHKRHEAETFDLSKKIWGK 214 9***************************************************************988899*******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MAPKNPISDQ QPPPPELEES SESSSEEEES VSNKHIPPPE PETMKESSEQ EEEESSEEEG 60 EEEGIKVVTP PKPTSKDSKS ISKHPFEAEK DDESDLRGKK KAKVNAEEFR KDSSSGGAGR 120 VWGEEDVIDL LQSMIDFKDE KGVDPSSNMP AFYDFARGKL QFEFSNTQIY EKIRRLRIKF 180 FNNMEKYEKG GEDLVFHKRH EAETFDLSKK IWGKGGDGMI NKGVDKNVDG KSNNGYNGKA 240 KKGGKTVRSV DKNAVKELGK DDHEGDFESK YPFLSHSIDM DVGGGFLREN ISLIGDAKAK 300 DLEGKWKKFR EAEVEVLLMK MDLMKEHTKL VLEGMKESN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	7e-21	GeBP family protein