PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027075833.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 357aa MW: 41157.2 Da PI: 5.1363

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027075833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.3	2.2e-17	75	165	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF++rks+ k+ +g + r++vC++eg+r+e+ k ++ +++ ++ trtg a+++vk + + +++vt++ eHnH+la XP_027075833.1 75 EFYNLYAKLSGFKIRKSNGKRD-ADGISKFRKWVCYCEGYRDEKWFKyEDWKKEAKPITRTGNGACFRVKYDIeSLNYVVTSFIVEHNHPLA 165 6*************998887.899999**********9877567788999***********98899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MVKETQGGRL RMDGGGKRKS FDVDLEPECD RDIDSPESGG SSGGHQDEKA EELLGAIDMD 60 DVMKLTFDTE EEAGEFYNLY AKLSGFKIRK SNGKRDADGI SKFRKWVCYC EGYRDEKWFK 120 YEDWKKEAKP ITRTGNGACF RVKYDIESLN YVVTSFIVEH NHPLASEATG GYSNVGFCIK 180 DLYNRMDEER RKDIFNGYVE GALGFLATKK DVDDMFFYKY HVDNEGRLAR LVWADSKSQV 240 DFSTFGDVLE FDMTYKTNKY RKPLVVFAGV NNHLNSTIFG CALLSDERIE TYEWVLSTLI 300 EAMDDRKPVV VMTDEDSTMQ RAIKNLFPDP CHRLYSWHLH RNASSNILCK EFNDRFV

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MVKETQGGRL RMDGGGKRKS FDVDLEPECD RDIDSPESGG SSGGHQDEKA EELLGAIDMD  60
DVMKLTFDTE EEAGEFYNLY AKLSGFKIRK SNGKRDADGI SKFRKWVCYC EGYRDEKWFK  120
YEDWKKEAKP ITRTGNGACF RVKYDIESLN YVVTSFIVEH NHPLASEATG GYSNVGFCIK  180
DLYNRMDEER RKDIFNGYVE GALGFLATKK DVDDMFFYKY HVDNEGRLAR LVWADSKSQV  240
DFSTFGDVLE FDMTYKTNKY RKPLVVFAGV NNHLNSTIFG CALLSDERIE TYEWVLSTLI  300
EAMDDRKPVV VMTDEDSTMQ RAIKNLFPDP CHRLYSWHLH RNASSNILCK EFNDRFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-46	FAR1 family protein