PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027075817.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 252aa MW: 28131.8 Da PI: 6.711 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 178.3 | 7e-56 | 78 | 173 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfedyv plk+yl+kyrelege XP_027075817.1 78 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVTPLKQYLSKYRELEGE 172 89*******************************************************************************************99 PP NF-YB 97 k 97 k XP_027075817.1 173 K 173 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MADERCGIGP NVPIKGSLEN QCSLSSSSNT NNDNNNNNSS SSLSIATVIA TYNHHNNNNS 60 NNNNGSSSSC GNNSNNNKEQ DRFLPIANVG RIMKKVIPGN GKISKDAKET VQECVSEFIS 120 FVTGEASDKC QREKRKTING DDIIWAITTL GFEDYVTPLK QYLSKYRELE GEKLNVPKQQ 180 QQQQQQQQHH QRLQNHDQNP IMSPYHSVYS STNLLSQPPF VPSDQPFALP FSQSSIQTQL 240 PQQEHIDSVG HW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G13570.1 | 5e-70 | NF-YB family protein |