PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027075702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 180aa MW: 20219.3 Da PI: 10.166 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19 | 3.7e-06 | 64 | 86 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027075702.1 64 FVCEICNKGFQRDQNLQLHRRGH 86 89*******************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MNNSSAMATV PSASEEASVS SAGNPMIAAQ VGPVKKKRNL PGMPDPDAEV IALSPKTLLA 60 TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLRQRNGKEV KKRVYVCPEA TCIHHDPSRA 120 LGDLTGIKKH FCRKHGEKKW KCERCSKKYA VISDWKAHTK TCGTREYRCD CGTLFSRSCH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 3e-99 | C2H2 family protein |