PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027075565.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 363aa MW: 39897.4 Da PI: 9.6465

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027075565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.5	2.1e-31	290	347	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ XP_027075565.1 290 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHS 347 99**********************988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MAVELMLGYR NTTDNFVTQL EESGAVQEAA CSGLESVEKL IQLFSRKEQK GTRTISSEQK 60 NSSMEIEMDC KVETDAAVTK FKKVISLLGR TRTGHARFRR GPVPVATNPV PLMDCSTEEV 120 ADTKVYCPTP IQQIPPPLHD FHLRNRNHHV ISHQTDVNQV TSTFSQTSTG GVVVEKREPI 180 SRSISFSYSP AISHANSFIS SLTGETDSKR LISSSSAFQL TNLSQVSSAG KPPLSSSSSF 240 KRKCISENGI SGKCSPSAGR CHCSKKRKLR LKRVIRVPAI SMKMADIPPD DYSWRKYGQK 300 PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPAMLVVTY EGEHNHSLSV AETNAAALIL 360 ESS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MAVELMLGYR NTTDNFVTQL EESGAVQEAA CSGLESVEKL IQLFSRKEQK GTRTISSEQK  60
NSSMEIEMDC KVETDAAVTK FKKVISLLGR TRTGHARFRR GPVPVATNPV PLMDCSTEEV  120
ADTKVYCPTP IQQIPPPLHD FHLRNRNHHV ISHQTDVNQV TSTFSQTSTG GVVVEKREPI  180
SRSISFSYSP AISHANSFIS SLTGETDSKR LISSSSAFQL TNLSQVSSAG KPPLSSSSSF  240
KRKCISENGI SGKCSPSAGR CHCSKKRKLR LKRVIRVPAI SMKMADIPPD DYSWRKYGQK  300
PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPAMLVVTY EGEHNHSLSV AETNAAALIL  360
ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	4e-80	WRKY family protein