PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027074519.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 352aa    MW: 39413.1 Da    PI: 6.7901
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027074519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.1e-09188235455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_027074519.1 188 SHSLAERARREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 235
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MLHCMQTPSP ENFTAAGMIA DMSVLERQRA VLQRLYQQQQ HQQDMHSSQP TTSSMPLFQY  60
QNLVNPLKVH QENSPNFGFT CSEITTTNTN LEMDHHQLSC SNVTAASSKT HHVAPSKKRK  120
AEFDVEEECK DKRVEGEAGE VQSGITVKSE KENSGRNSRE NSSSKASEVV QKTDYIHVRA  180
RRGQATDSHS LAERARREKI SKKMKCLQDL VPGCNKVTGK AGMLDEIINY VQSLQKQVEF  240
LSMKLATLNP RLDFNVDNIF AKEFPAYIAS FPTAATPIEV VHSALLQFNQ GQQEPTSSGP  300
DMAINPAQMV PQRTGTSSLT FPEAYFDSIS SLSTPTWDSD WQSFYNNVVS YH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.23e-56bHLH family protein