PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027074474.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CAMTA

Protein Properties

Length: 1096aa MW: 122276 Da PI: 5.5952

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027074474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.1	6.2e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+e++++fqr XP_027074474.1 20 VEAQHRWLRPAEICEILRNYQKFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDDENFQR 114 6779***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Leeel++ivlvhy+evk XP_027074474.1 115 RSYWMLEEELSHIVLVHYREVK 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1096 aa Download sequence
MAESRRYALG AQLDIEQILV EAQHRWLRPA EICEILRNYQ KFRIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDDE NFQRRSYWML 120 EEELSHIVLV HYREVKGNRT NYNRVREIGE AIPNTQESED DAPNSEFNSN STSKFHSYGY 180 QVTSQITDTV SLNSAQASEY EDAESAYTQQ STSGFHTFLE IQPPVLQKAE DGYQGQFSGV 240 PDVNFASIPQ GEKDQSTTGA GLSYMPEGHL DFPSWGNVLD SRNGGYQSVN FQPSVSATQH 300 GTINVMPGGM NDILGQALTD GLGKRQDSDA HVGGLEQWQT SEVDASSLSK WHMDQKLNLP 360 SGRNLSTSFN EVNNAELPNS SETFSMLKSP IETDVQVDLI RAESGISAKS AFNGNLGIEG 420 KAEYPTLRQP LLDGVLKEGL KKLDSFDRWM SRELGDVNES HIQSSSGTYW ETVGNDDGLG 480 DSNIAPQVHI DSYMMSPSIA QDQLFSIIDF SPNWAYSGSE MKVLIMGRFL KSQEELGKYK 540 WACMFGEVEV QAEVIANGAL RCLTPLHEAG RVPFYVTCSN RLACSEVREF EFRVSNVKDD 600 DVALLTSGII DECQLLTRFG KLLTTGSHNY QDTIPGIMDQ LSTLRSKIES LVINDNNEWE 660 GMLNLTPEEF SVDKVKDQLL VKLLKDRLYL WLRQKVAEGG KGPSMLDEGG QGVLHLAAAL 720 GYDWALSPTI AAGVSVNFRD LNGWTALHWA ASFGRERTVA SLISLGASPG ALTDPTPKYP 780 SGIPPAELAS NNGHKGIAGY LAESTLSSHL SSLKVKDDKE GYKDDKEDYN GEGSGANVVQ 840 TASERTATPI ADGDLPVLSL KDSLAAVRNA TQAHARIHQV FRVQSFQRKQ QNEYGSSGLG 900 ISDERALSLL SAKTKRAGQR DEPVHAAATQ IQKKFRSWKG RKEFLQKRQQ IIKIQAHVRG 960 HQVRKNYRSI IWSVGILEKV ILRWRRKGSG LRGFKPEAPP VETSIQGSSS KEDDYDFLKE 1020 GRKQTENRLQ KALARVKSMV QYPEARDQYR RLLNVVSDMQ ETKAVYDRAL DNSDEAADFD 1080 EDLIDLDALL DDDPLM

Sequence ? help Back to Top

Protein Sequence Length: 1096 aa Download sequence

MAESRRYALG AQLDIEQILV EAQHRWLRPA EICEILRNYQ KFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDDE NFQRRSYWML  120
EEELSHIVLV HYREVKGNRT NYNRVREIGE AIPNTQESED DAPNSEFNSN STSKFHSYGY  180
QVTSQITDTV SLNSAQASEY EDAESAYTQQ STSGFHTFLE IQPPVLQKAE DGYQGQFSGV  240
PDVNFASIPQ GEKDQSTTGA GLSYMPEGHL DFPSWGNVLD SRNGGYQSVN FQPSVSATQH  300
GTINVMPGGM NDILGQALTD GLGKRQDSDA HVGGLEQWQT SEVDASSLSK WHMDQKLNLP  360
SGRNLSTSFN EVNNAELPNS SETFSMLKSP IETDVQVDLI RAESGISAKS AFNGNLGIEG  420
KAEYPTLRQP LLDGVLKEGL KKLDSFDRWM SRELGDVNES HIQSSSGTYW ETVGNDDGLG  480
DSNIAPQVHI DSYMMSPSIA QDQLFSIIDF SPNWAYSGSE MKVLIMGRFL KSQEELGKYK  540
WACMFGEVEV QAEVIANGAL RCLTPLHEAG RVPFYVTCSN RLACSEVREF EFRVSNVKDD  600
DVALLTSGII DECQLLTRFG KLLTTGSHNY QDTIPGIMDQ LSTLRSKIES LVINDNNEWE  660
GMLNLTPEEF SVDKVKDQLL VKLLKDRLYL WLRQKVAEGG KGPSMLDEGG QGVLHLAAAL  720
GYDWALSPTI AAGVSVNFRD LNGWTALHWA ASFGRERTVA SLISLGASPG ALTDPTPKYP  780
SGIPPAELAS NNGHKGIAGY LAESTLSSHL SSLKVKDDKE GYKDDKEDYN GEGSGANVVQ  840
TASERTATPI ADGDLPVLSL KDSLAAVRNA TQAHARIHQV FRVQSFQRKQ QNEYGSSGLG  900
ISDERALSLL SAKTKRAGQR DEPVHAAATQ IQKKFRSWKG RKEFLQKRQQ IIKIQAHVRG  960
HQVRKNYRSI IWSVGILEKV ILRWRRKGSG LRGFKPEAPP VETSIQGSSS KEDDYDFLKE  1020
GRKQTENRLQ KALARVKSMV QYPEARDQYR RLLNVVSDMQ ETKAVYDRAL DNSDEAADFD  1080
EDLIDLDALL DDDPLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein