PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027074412.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 401aa MW: 44828.5 Da PI: 6.6194

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027074412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.2	1.4e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_027074412.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRSLPI-ELIKQVDIYKYDPWDLPKLASSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579*************************.89***********8888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_027074412.1 108 dGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MDDKGDGDKI DDVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKYDPWDLP 60 KLASSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPTTSESAPP KKLADKNLSL HDSWAICRIF KKTSSLAHRA 180 LSHTWMAPVS ETSPDIFPQG AQYAQYGSEN LSCATESGST MQLYTNNDLQ SASTAIFSAL 240 NIPSCKPLNG LLSKPSFLAG PNGDIPCNFM FPPSEISGPP NKCSLDVPSM LFNLSPTFLG 300 DVNKTSESIE FEGSQHHFNS FSMNPSPDMQ EGISIENDEG GLRKDPRDGD ASNQWENMRA 360 IGFPFSLPST LPDVWKPNLP WDSSNCPSEI STTYSANKCY T

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MDDKGDGDKI DDVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKYDPWDLP  60
KLASSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV  120
FYRGRAAKGI KTDWMMHEFR LPTTSESAPP KKLADKNLSL HDSWAICRIF KKTSSLAHRA  180
LSHTWMAPVS ETSPDIFPQG AQYAQYGSEN LSCATESGST MQLYTNNDLQ SASTAIFSAL  240
NIPSCKPLNG LLSKPSFLAG PNGDIPCNFM FPPSEISGPP NKCSLDVPSM LFNLSPTFLG  300
DVNKTSESIE FEGSQHHFNS FSMNPSPDMQ EGISIENDEG GLRKDPRDGD ASNQWENMRA  360
IGFPFSLPST LPDVWKPNLP WDSSNCPSEI STTYSANKCY T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	8e-97	NAC family protein