PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027074295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 408aa MW: 44292.6 Da PI: 5.6935 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 49.5 | 7.8e-16 | 152 | 198 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq XP_027074295.1 152 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 198 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MANLYDTANC SSSSPDDPDD FSLFLHQIML RSRTSSSTSF MAQKGNEVQS YPGNQGCGLH 60 LVSSTERISI PEAPSAGLQH WSYGGGFTSP GLGSFCQESG VNVSSSSVSV ATMDNDLNDY 120 DCESEGLEVL EEAMVNPTAP RNASKRSRAA EVHNLSEKRR RSRINEKMKA LQNLIPNSNK 180 TDKASMLDEA IEYLKQLQLQ VQLLTVRNGL SLYPMCLPGV LPSNQVPETR TEYEDNRSLD 240 MSLASALPLK PVTPTNILFD LPDNFKKAKQ ASDVNQSKLS DSEDAFAPAS IIHGNHRPIQ 300 FPLPGTSKKG TCMGQKSPSQ QANQDLSRRK SVAKHIGAEA TGSTALNALP SGLEQNILEA 360 WVLGRDQSGG RLLKNMECKN LLLSQVDGTQ TGPSPLVDDS IKAERCDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 3e-33 | bHLH family protein |