PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027073607.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 506aa    MW: 57006.5 Da    PI: 5.2445
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027073607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.55e-1101255053374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + Lle A+a+++++ +++q+l++ l+el+sp+gd+ q+la+yf++AL +r+++s++++y++l + ++++ + +++ +++  f+evsP+ +f+h++
  XP_027073607.1 125 DILLETARAIADKNSSRVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTDSGERCYRTLVSASENTCSFESTRKMVLKFQEVSPWTTFGHVA 219
                     679***********************************************************8888876665555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg........skeeleetgerLakfAeelgvpfefnvlvak 184
                     +N aIleavege ++HiiD++ + ++QWp+Ll+aLa+R++++p+lR+T+v+ +++g         ++ ++e+g+r++kfA+ +gvpf+fnvl++ 
  XP_027073607.1 220 CNGAILEAVEGEPKLHIIDISNTFCTQWPTLLEALATRSDETPHLRLTTVVVSKAGgagggaagVQKVMKEIGSRMEKFARLMGVPFKFNVLHHA 314
                     ***************************************************9888899****99999*************************777 PP

            GRAS 185 .rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleak 274
                      +l++l+l+eL++k++Eala+n+v +lh++     +l ++rd ++++++sl+P+++ vve+ead++ +    +F+++f e+l+++ + f+sl+ +
  XP_027073607.1 315 gDLSELNLSELDIKEDEALAINCVGALHSVS----TLGNRRDFLISIFRSLQPRIIAVVEEEADLDVGfdgyDFVKGFQECLRWFRVYFESLDDS 405
                     7*****************************8....8999999********************99865555569********************** PP

            GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpL 367
                     +p++s+er ++Er+  gr+iv++vac  ae++er+et+ +W++rl+++GF+pv++s+++ +++++llr++k dg+++   +es+ ++l Wkd+p+
  XP_027073607.1 406 FPKTSNERLMLERQ-AGRAIVDLVACPAAESIERRETATRWSHRLHASGFGPVSFSDEVCDDVRALLRRYK-DGWSMAqcNESAGIFLSWKDQPV 498
                     **************.********************************************************.776666446778888******** PP

            GRAS 368 vsvSaWr 374
                     v++SaWr
  XP_027073607.1 499 VWASAWR 505
                     ******8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MDTLFRLVSL QQPSDQSFNS SRTSSSSRSS RQNHHYNQHQ QEEEEECFNF FMDDEDFSSS  60
SSRPHYNPYQ QHQQQQTSST PTPTTTNTSS TPTHHPYESA DFSFSPARDI NQEFASSFSG  120
KWASDILLET ARAIADKNSS RVQQLMWMLN ELSSPYGDTD QKLASYFLQA LFSRMTDSGE  180
RCYRTLVSAS ENTCSFESTR KMVLKFQEVS PWTTFGHVAC NGAILEAVEG EPKLHIIDIS  240
NTFCTQWPTL LEALATRSDE TPHLRLTTVV VSKAGGAGGG AAGVQKVMKE IGSRMEKFAR  300
LMGVPFKFNV LHHAGDLSEL NLSELDIKED EALAINCVGA LHSVSTLGNR RDFLISIFRS  360
LQPRIIAVVE EEADLDVGFD GYDFVKGFQE CLRWFRVYFE SLDDSFPKTS NERLMLERQA  420
GRAIVDLVAC PAAESIERRE TATRWSHRLH ASGFGPVSFS DEVCDDVRAL LRRYKDGWSM  480
AQCNESAGIF LSWKDQPVVW ASAWRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein