PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027073481.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 541aa    MW: 58730.1 Da    PI: 6.1361
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027073481.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-30208266259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  XP_027073481.1 208 SDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHP 266
                     7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MAEDKISDDS VSHHAVECSK EAFKDDEFES AKAEMSEVRE ENARLKTLLE KIEKDYKSLQ  60
MRFVDICQPE ANKKSDHDPP RSGNGQIEEL ELVSLCLGRS PSDPKKNNND SSSSFKNRKE  120
DENLKEGLKL GLDFNCFQDC KSDAIDLSTD PSPDNSALES KEEEAAGETW PPSKVLKAMR  180
NEDDDLSQAS IKRARVSVRA RCDTPTMSDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP  240
VRKQVQRCAE DMSILITTYE GTHNHPLPVS ATAMASATAA AASMLLSGSS SSEPGLGPAA  300
TTNLRSNLHG LNVNLSDNSK YHPYYLPNSS SSPFPSITLD LTTNPSTSSA QFNMFSSTSL  360
QSRLPSTSLS FSPSQTNVPP ALWSNNNLNY GAISYNKNQM ISTLSSGRTS QEHLYQPFKQ  420
KNYQAPASQQ ALTETLTKAI TSDPSFRSVI AAAITTMVGG GGATPANIKV ENLGKKLKWD  480
EQMTVTSSNG CTSSFLSQSS SSASQSVNLR KQRTQPAFSV SIGAPSATPV DDMDQTNSGE  540
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-86WRKY family protein